Nitratifractor salsuginis DSM 16511

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Sulfurovaceae

Genus

Nitratifractor

Description

Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) is a strictly chemolithoautotrophic, denitrifying Gram-negative bacterium isolated from deep-sea hydrothermal vent chimney structures at the Iheya North hydrothermal field in the Mid-Okinawa Trough, Japan. Cells have a mean length of 2.5 mm and a width of approximately 0.6 mm. N. salsuginis grows by respiratory nitrate reduction with H2 as electron donor and nitrate as electron acceptor, forming N2 as a metabolic product. Oxygen, at low concentrations, could serve as an alternative electron acceptor for growth. Growth is observed at temperatures between 28 and 40 degrees Celsius with an optimum at 37.6 degrees Celsius, and at pH values between 5.6 and 7.6, with an optimum at pH 7.0. It is able to grow in the presence of between 1.5 and 3.5% (w/v) NaCl, with an optimum at 3.0. (Adapted from PMID: 15774687). (HAMAP: NITSE)

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilySulfurovaceae
GenusNitratifractor
SpeciesNitratifractor salsuginis
StrainDSM 16511

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Nitratifractor salsuginis DSM 16511
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Nitratifractor salsuginis DSM 16511, complete sequence.

Gene Summary

Adenine Count

486587 bp

Thymine Count

481855 bp

Guanine Count

568032 bp

Cytosine Count

564811 bp

Genome Length

2101285 bp

Protein-coding Genes

2080 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubix family flavin prenyltransferaseNITSA_RS04850Not AvailableNegative952404 - 95292818722.8
ompa family proteinNITSA_RS11595Not AvailableNegative952944 - 95346518362.7
yqia/ycfp family alpha/beta fold hydrolaseNITSA_RS04860Not AvailableNegative953683 - 95426121699.8
dna polymerase/3'-5' exonuclease polxNITSA_RS04865Not AvailableNegative954258 - 95599465694.8
l,d-transpeptidase family proteinNITSA_RS10840Not AvailablePositive956201 - 95685724420.8
mbl fold metallo-hydrolase rna specificity domain-containing proteinNITSA_RS04875Not AvailablePositive956992 - 95839253672.2
plasma-membrane proton-efflux p-type atpaseNITSA_RS04880Not AvailablePositive958474 - 961194101887.0
nad(p)/fad-dependent oxidoreductaseNITSA_RS04885Not AvailablePositive961178 - 96258150911.3
plasma-membrane proton-efflux p-type atpaseNITSA_RS04890Not AvailablePositive962611 - 965364102181.0
polyphosphate kinase 2NITSA_RS04895Not AvailablePositive965379 - 96613730070.4

Displaying genes 1081 – 1090 of 2184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.