Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Breznakiellaceae
Genus
Gracilinema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Breznakiellaceae |
| Genus | Gracilinema |
| Species | Gracilinema caldarium |
| Strain | DSM 7334 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
882974 bp
Thymine Count
880008 bp
Guanine Count
740972 bp
Cytosine Count
735386 bp
Genome Length
3239340 bp
Protein-coding Genes
2874 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose pyranase | SPICA_RS04140 | Not Available | Positive | 898246 - 898641 | 14538.9 |
| sugar abc transporter atp-binding protein | SPICA_RS04145 | Not Available | Positive | 898651 - 900126 | 54480.0 |
| abc transporter permease | SPICA_RS04150 | Not Available | Positive | 900129 - 901061 | 32423.7 |
| ribose abc transporter substrate-binding protein rbsb | SPICA_RS04155 | Not Available | Positive | 901082 - 901969 | 30372.1 |
| ribokinase | SPICA_RS04160 | Not Available | Positive | 901995 - 902867 | 31239.5 |
| acyl-[acyl-carrier-protein] thioesterase | SPICA_RS04165 | Not Available | Positive | 902955 - 903773 | 31643.8 |
| thioredoxin family protein | SPICA_RS04170 | Not Available | Positive | 903886 - 904119 | 8441.6 |
| permease | SPICA_RS04175 | Not Available | Positive | 904123 - 905307 | 42605.6 |
| endo-1,4-beta-xylanase | SPICA_RS04180 | Not Available | Negative | 905352 - 906437 | 41784.4 |
| family 16 glycosylhydrolase | SPICA_RS04185 | Not Available | Positive | 906544 - 907329 | 29732.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.