Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Breznakiellaceae
Genus
Gracilinema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Breznakiellaceae |
| Genus | Gracilinema |
| Species | Gracilinema caldarium |
| Strain | DSM 7334 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
882974 bp
Thymine Count
880008 bp
Guanine Count
740972 bp
Cytosine Count
735386 bp
Genome Length
3239340 bp
Protein-coding Genes
2874 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SPICA_RS00295 | Not Available | Positive | 64624 - 65964 | 48187.2 |
| carbohydrate abc transporter permease | SPICA_RS00300 | Not Available | Positive | 66051 - 66953 | 33840.2 |
| carbohydrate abc transporter permease | SPICA_RS00305 | Not Available | Positive | 66966 - 67817 | 31081.2 |
| hd domain-containing phosphohydrolase | SPICA_RS15850 | Not Available | Negative | 67904 - 69499 | 60728.8 |
| exodeoxyribonuclease v subunit beta | SPICA_RS00315 | Not Available | Negative | 69489 - 73022 | 134046.0 |
| pd-(d/e)xk nuclease family protein | SPICA_RS00320 | Not Available | Negative | 73019 - 75892 | 109862.0 |
| tagaturonate epimerase family protein | SPICA_RS00325 | Not Available | Negative | 75935 - 77185 | 46927.0 |
| sdr family oxidoreductase | SPICA_RS00330 | Not Available | Negative | 77255 - 78091 | 29642.9 |
| deor/glpr family dna-binding transcription regulator | SPICA_RS00335 | Not Available | Negative | 78163 - 78915 | 27976.6 |
| carbohydrate kinase family protein | SPICA_RS00340 | Not Available | Positive | 79094 - 80005 | 33965.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.