Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Breznakiellaceae
Genus
Gracilinema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Breznakiellaceae |
| Genus | Gracilinema |
| Species | Gracilinema caldarium |
| Strain | DSM 7334 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
882974 bp
Thymine Count
880008 bp
Guanine Count
740972 bp
Cytosine Count
735386 bp
Genome Length
3239340 bp
Protein-coding Genes
2874 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin | SPICA_RS09350 | Not Available | Negative | 2019745 - 2020320 | 21316.2 |
| tetratricopeptide repeat protein | SPICA_RS09355 | Not Available | Negative | 2020422 - 2022164 | 66148.9 |
| hypothetical protein | SPICA_RS09360 | Not Available | Negative | 2022171 - 2022725 | 20606.3 |
| lipopolysaccharide assembly protein lapb | SPICA_RS09365 | Not Available | Positive | 2022795 - 2023850 | 41057.9 |
| transglycosylase slt domain-containing protein | SPICA_RS09370 | Not Available | Positive | 2023850 - 2025259 | 52608.0 |
| hypothetical protein | SPICA_RS09375 | Not Available | Positive | 2025263 - 2026186 | 34340.0 |
| signal peptide peptidase sppa | SPICA_RS09380 | Not Available | Negative | 2026158 - 2027342 | 43422.2 |
| hypothetical protein | SPICA_RS09385 | Not Available | Negative | 2027455 - 2028741 | 47054.1 |
| atp-dependent chaperone clpb | SPICA_RS09390 | Not Available | Negative | 2028867 - 2031437 | 95809.2 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | SPICA_RS09395 | Not Available | Negative | 2031629 - 2033542 | 71146.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.