Barnesiella intestinihominis YIT 11860

Gram-negativerodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Barnesiellaceae

Genus

Barnesiella

Description

Barnesiella intestinihominis YIT 11860 is a gram-negative, rod-shaped bacterium that thrives in a mesophilic temperature range, is classified as a chemoheterotroph, and is an obligate anaerobe. This microbe predominantly colonizes the human gastrointestinal tract, where it plays a crucial role in maintaining gut health and can also be found in other body sites such as the oral cavity and feces. As a gram-negative bacterium, Barnesiella intestinihominis has a thin peptidoglycan layer, surrounded by an outer membrane containing lipopolysaccharides, which contribute to its pathogenicity and interactions with the host immune system. The rod-shaped morphology of this microbe is typical of many gut bacteria, allowing for efficient colonization and nutrient absorption within the complex environment of the intestines. Its mesophilic preference indicates that it thrives optimally at moderate temperatures, aligning with the conditions present in the human body. Being a chemoheterotroph, Barnesiella intestinihominis acquires energy by metabolizing organic compounds derived from dietary sources, playing a vital role in the breakdown of complex carbohydrates. As an obligate anaerobe, it can only survive in environments devoid of oxygen, making the anaerobic conditions of the intestines ideal for its growth and proliferation. Research has shown that Barnesiella intestinihominis may have a positive impact on gut health by contributing to the balance of intestinal microbiota. Its presence is associated with various health benefits, including immune modulation and potential protective effects against certain gastrointestinal disorders. Additionally, this microbe may aid in the metabolization of dietary fibers, producing short-chain fatty acids, which are beneficial for colonic health and overall metabolic processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBarnesiellaceae
GenusBarnesiella
SpeciesBarnesiella intestinihominis
StrainYIT 11860

Profile

Physiology
Gram staining propertiesNegative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Barnesiella intestinihominis YIT 11860


Gene Summary

Adenine Count

982618 bp

Thymine Count

943318 bp

Guanine Count

722237 bp

Cytosine Count

785533 bp

Genome Length

3433706 bp

Protein-coding Genes

2813 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinHMPREF9448_00001Not Available-706 - 8705957.84
Trna-alaNot AvailableNot Available+1294 - 1370Not Available
Trna-ileNot AvailableNot Available+1394 - 1470Not Available
16s ribosomal rnaNot AvailableNot Available+1593 - 3112Not Available
hypothetical proteinHMPREF9448_00005Not Available-3741 - 38725163.32
hypothetical proteinHMPREF9448_00006Not Available-3887 - 545860197.3
5s ribosomal rnaNot AvailableNot Available+5735 - 5842Not Available
hypothetical proteinHMPREF9448_00007Not Available-5470 - 8475113557.0
nad-specific glutamate dehydrogenaseHMPREF9448_00008Not Available+8625 - 995948641.5
hypothetical proteinHMPREF9448_00009Not Available+10100 - 1194471249.4

Displaying genes 1 – 10 of 2879 in total

Metabolites

485 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da

Displaying 1–10 of 485 metabolites