Escherichia coli Xuzhou21

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli Xuzhou21 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells, demonstrating its adaptability to various environments. This strain thrives optimally at 37.0°C, a temperature that aligns with the physiological conditions of warm-blooded hosts, reflecting its host-associated habitat. As a facultative anaerobe, E. coli Xuzhou21 can utilize oxygen when available but is also capable of fermentative metabolism in anaerobic conditions, allowing it to survive in diverse microenvironments within its host. The ability of E. coli Xuzhou21 to exist in pairs or as single cells may facilitate its colonization and interaction with host tissues, potentially enhancing its survival and adaptation strategies. Given its optimal growth temperature and metabolic versatility, E. coli Xuzhou21 may play a significant role in the microbiota of its host, where it could contribute to nutrient cycling and the maintenance of intestinal homeostasis. Understanding the specific ecological role of E. coli Xuzhou21 within its host could provide insights into the complex interactions between microbial communities and their hosts, particularly in terms of health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainXuzhou21

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli Xuzhou21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli Xuzhou21 plasmid pO157, complete sequence.

Gene Summary

Adenine Count

24869 bp

Thymine Count

23720 bp

Guanine Count

23873 bp

Cytosine Count

20266 bp

Genome Length

92728 bp

Protein-coding Genes

96 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-xylose transporter xyleCDCO157_RS25585P0AGF5Negative4982033 - 498350853611.2
maltose abc transporter permease malgCDCO157_RS25590P68185Negative4983880 - 498477032227.3
maltose abc transporter permease malfCDCO157_RS25595Q7A937Negative4984785 - 498632957115.8
maltose/maltodextrin abc transporter substrate-binding protein maleCDCO157_RS25600P0AEY0Negative4986483 - 498767343389.9
maltose/maltodextrin abc transporter atp-binding protein malkCDCO157_RS25610P68188Positive4988038 - 498915340993.0
maltoporin lambCDCO157_RS25615Q8X5W7Positive4989225 - 499056549970.9
maltose operon protein malmCDCO157_RS25620P03841Positive4990716 - 499163631945.2
sopa family proteinCDCO157_RS25625P32690Positive4991865 - 499344561130.9
chorismate lyaseCDCO157_RS25630Q8XEC3Positive4993668 - 499416518792.0
4-hydroxybenzoate octaprenyltransferaseCDCO157_RS25635A7ZUR2Positive4994178 - 499505032513.6

Displaying genes 5111 – 5120 of 5524 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.