Escherichia coli Xuzhou21

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli Xuzhou21 is a Gram-negative, rod-shaped bacterium typically found in pairs or as single cells, demonstrating its adaptability to various environments. This strain thrives optimally at 37.0°C, a temperature that aligns with the physiological conditions of warm-blooded hosts, reflecting its host-associated habitat. As a facultative anaerobe, E. coli Xuzhou21 can utilize oxygen when available but is also capable of fermentative metabolism in anaerobic conditions, allowing it to survive in diverse microenvironments within its host. The ability of E. coli Xuzhou21 to exist in pairs or as single cells may facilitate its colonization and interaction with host tissues, potentially enhancing its survival and adaptation strategies. Given its optimal growth temperature and metabolic versatility, E. coli Xuzhou21 may play a significant role in the microbiota of its host, where it could contribute to nutrient cycling and the maintenance of intestinal homeostasis. Understanding the specific ecological role of E. coli Xuzhou21 within its host could provide insights into the complex interactions between microbial communities and their hosts, particularly in terms of health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainXuzhou21

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli Xuzhou21
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli Xuzhou21 plasmid pO157, complete sequence.

Gene Summary

Adenine Count

24869 bp

Thymine Count

23720 bp

Guanine Count

23873 bp

Cytosine Count

20266 bp

Genome Length

92728 bp

Protein-coding Genes

96 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein ycixCDCO157_RS09530P58094Positive1837937 - 18381046334.2
small membrane protein ymicCDCO157_RS32140P0DPO1Positive1838218 - 18383133822.77
aconitate hydratase acnaCDCO157_RS09545P25516Positive1838477 - 184115297664.8
gtp cyclohydrolase iiCDCO157_RS09550A7ZL97Negative1841216 - 184180621837.3
phosphatidylglycerophosphatase bCDCO157_RS09555P0A925Positive1841976 - 184274029022.8
lipopolysaccharide assembly protein lapaCDCO157_RS09560P0ACV4Positive1842889 - 184319711411.2
lipopolysaccharide assembly protein lapbCDCO157_RS09565P0AB60Positive1843204 - 184437344533.6
orotidine-5'-phosphate decarboxylaseCDCO157_RS09570P58640Positive1844566 - 184530326231.6
stress response translation initiation inhibitor ycihCDCO157_RS09575P08245Positive1845303 - 184562911400.9
osmotically-inducible lipoprotein osmbCDCO157_RS09580P0ADA9Negative1845755 - 18459736948.51

Displaying genes 2321 – 2330 of 5524 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.