Frankia sp. QA3

Gram-positiveFilamentous

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Frankia

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusFrankia
SpeciesFrankia sp. QA3
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Frankia sp. QA3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frankia sp. QA3 chromosome, whole genome shotgun sequence.

Gene Summary

Adenine Count

1037977 bp

Thymine Count

1039210 bp

Guanine Count

2747308 bp

Cytosine Count

2754456 bp

Genome Length

7590853 bp

Protein-coding Genes

6378 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-type recombinase/integraseFRAQA3DRAFT_RS38525Not AvailablePositive1949292 - 194979218163.8
sigma-70 family rna polymerase sigma factorFRAQA3DRAFT_RS07820Not AvailableNegative1949903 - 195081432300.8
duf2599 domain-containing proteinFRAQA3DRAFT_RS07825Not AvailableNegative1951111 - 195164518541.7
tigr03620 family f420-dependent llm class oxidoreductaseFRAQA3DRAFT_RS07830Not AvailablePositive1951988 - 195286630562.2
glsb/yeaq/ymge family stress response membrane proteinFRAQA3DRAFT_RS07835Not AvailableNegative1952992 - 19532739703.29
sdr family oxidoreductaseFRAQA3DRAFT_RS07840Not AvailableNegative1953550 - 195438629547.7
transposaseFRAQA3DRAFT_RS38530Not AvailablePositive1954794 - 19549947384.91
is5/is1182 family transposaseFRAQA3DRAFT_RS35845Not AvailableNegative1954958 - 19551788099.77
sec-independent protein translocase subunit tataFRAQA3DRAFT_RS07855Not AvailablePositive1955350 - 19556469767.68
dsba family oxidoreductaseFRAQA3DRAFT_RS07860Not AvailablePositive1956509 - 195715924174.4

Displaying genes 1631 – 1640 of 6431 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.