Pseudomonas flexibilis str. JCM 14085

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas flexibilis strain JCM 14085 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, characterizing it as an aerobic organism. This strain belongs to the genus Pseudomonas, which is known for its metabolic versatility and ability to thrive in diverse environments. The rod shape is typical of this genus, which often exhibits a range of morphological adaptations allowing for survival in fluctuating conditions. As an aerobic microbe, Pseudomonas flexibilis str. JCM 14085 utilizes oxygen for its metabolic processes, which may confer advantages in oxygen-rich environments such as soil, water, and various ecological niches where organic matter is present. The ability of Pseudomonas species to degrade a wide array of organic compounds further suggests that strain JCM 14085 may play a role in biogeochemical cycles, particularly in the decomposition of organic materials. Research into this strain could provide insights into its potential applications in bioremediation, as members of the Pseudomonas genus are often studied for their ability to break down pollutants. Additionally, the metabolic pathways utilized by Pseudomonas flexibilis str. JCM 14085 may shed light on the ecological roles of aerobic bacteria in nutrient cycling and their interactions within microbial communities. Understanding these dynamics is essential for harnessing the beneficial traits of this microbe in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas flexibilis
StrainJCM 14085

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas flexibilis str. JCM 14085
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas flexibilis strain JCM 14085 PT85_16, whole genome

Gene Summary

Adenine Count

635269 bp

Thymine Count

645510 bp

Guanine Count

1241958 bp

Cytosine Count

1225665 bp

Genome Length

3748402 bp

Protein-coding Genes

3242 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding proteinPT85_02730Not AvailableNegative556262 - 55659112509.1
lysr family transcriptional regulatorPT85_02740Not AvailableNegative560218 - 56114433868.0
isopropylmalate isomerasePT85_02745Not AvailablePositive561304 - 56273151005.1
3-isopropylmalate dehydratasePT85_02750Not AvailablePositive562742 - 56338924319.7
3-isopropylmalate dehydrogenasePT85_02755Not AvailablePositive563496 - 56457838620.7
aspartate-semialdehyde dehydrogenasePT85_02760Not AvailablePositive564643 - 56575540713.4
hypothetical proteinPT85_02765Not AvailablePositive566103 - 56884197578.2
trna pseudouridine synthase aPT85_02770Not AvailablePositive568845 - 56969931462.8
n-(5'-phosphoribosyl)anthranilate isomerasePT85_02775Not AvailablePositive569758 - 57039022270.0
acetyl-coa carboxylase subunit betaPT85_02780Not AvailablePositive570532 - 57141632633.8

Displaying genes 571 – 580 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.