Phocaeicola vulgatus PC510

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus PC510 is a Gram-positive, rod-shaped bacterium that typically exists in a single-cell arrangement and is classified as an anaerobe. This microbe is host-associated, suggesting a symbiotic relationship with its host organism, potentially contributing to the host's microbiome dynamics. As an anaerobic organism, P. vulgatus PC510 thrives in environments devoid of oxygen, which is characteristic of many gut-associated microbes. Understanding the specific conditions under which this bacterium operates can illuminate its role within the host's gastrointestinal tract, where it may participate in various metabolic processes, including fermentation. The presence of P. vulgatus PC510 in the host-associated environment highlights the complex interactions that occur within microbial communities and their significance in maintaining host health. Further exploration of this bacterium's functional roles and interactions could yield insights into its contributions to nutrient metabolism and host immune modulation, underscoring the importance of anaerobic microbes in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainPC510

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus PC510
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus PC510 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1359298 bp

Thymine Count

1396111 bp

Guanine Count

1037487 bp

Cytosine Count

988803 bp

Genome Length

4781702 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dna-binding proteinCUU_3378Not AvailablePositive25359 - 2597023005.6
prolipoprotein diacylglyceryl transferaseCUU_3379Not AvailableNegative26012 - 2681831284.6
diaminopimelate dehydrogenaseCUU_3380Not AvailableNegative26925 - 2782432291.9
holliday junction dna helicase ruvaCUU_3381Not AvailablePositive28000 - 2859321141.8
putative lipoproteinCUU_3382Not AvailableNegative28681 - 2950530836.1
hd domain proteinCUU_3383Not AvailablePositive29607 - 3102554380.8
channel protein, hemolysin iii family proteinCUU_3384Not AvailablePositive31030 - 3166523650.2
anaerobic ribonucleoside-triphosphate reductaseCUU_3386Not AvailablePositive31960 - 3423686287.2
anaerobic ribonucleoside-triphosphate reductase activating proteinCUU_3387Not AvailablePositive34242 - 3470017410.7
conserved hypothetical proteinCUU_0685Not AvailablePositive35513 - 3676948877.9

Displaying genes 21 – 30 of 4019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.