Phocaeicola vulgatus PC510

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus PC510 is a Gram-positive, rod-shaped bacterium that typically exists in a single-cell arrangement and is classified as an anaerobe. This microbe is host-associated, suggesting a symbiotic relationship with its host organism, potentially contributing to the host's microbiome dynamics. As an anaerobic organism, P. vulgatus PC510 thrives in environments devoid of oxygen, which is characteristic of many gut-associated microbes. Understanding the specific conditions under which this bacterium operates can illuminate its role within the host's gastrointestinal tract, where it may participate in various metabolic processes, including fermentation. The presence of P. vulgatus PC510 in the host-associated environment highlights the complex interactions that occur within microbial communities and their significance in maintaining host health. Further exploration of this bacterium's functional roles and interactions could yield insights into its contributions to nutrient metabolism and host immune modulation, underscoring the importance of anaerobic microbes in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainPC510

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus PC510
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus PC510 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1359298 bp

Thymine Count

1396111 bp

Guanine Count

1037487 bp

Cytosine Count

988803 bp

Genome Length

4781702 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative lipoproteinCUU_2105Not AvailableNegative3458085 - 345857618002.5
bacterial transferase hexapeptide repeat proteinCUU_2106Not AvailableNegative3458622 - 345914618518.4
peptidase, m24 familyCUU_2107Not AvailableNegative3459156 - 346093766941.2
ribosomal protein s21CUU_2108Not AvailablePositive3461106 - 34612977526.36
putative tyrosine recombinase xercCUU_2109Not AvailablePositive3461375 - 346225634003.6
ribosomal subunit interface proteinCUU_2110Not AvailablePositive3462271 - 346257011325.7
Trna-thrNot AvailableNot AvailablePositive3462669 - 3462745Not Available
Trna-tyrNot AvailableNot AvailablePositive3462786 - 3462868Not Available
Trna-glyNot AvailableNot AvailablePositive3462902 - 3462974Not Available
Trna-thrNot AvailableNot AvailablePositive3462987 - 3463058Not Available

Displaying genes 2801 – 2810 of 4019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.