Phocaeicola vulgatus PC510

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus PC510 is a Gram-positive, rod-shaped bacterium that typically exists in a single-cell arrangement and is classified as an anaerobe. This microbe is host-associated, suggesting a symbiotic relationship with its host organism, potentially contributing to the host's microbiome dynamics. As an anaerobic organism, P. vulgatus PC510 thrives in environments devoid of oxygen, which is characteristic of many gut-associated microbes. Understanding the specific conditions under which this bacterium operates can illuminate its role within the host's gastrointestinal tract, where it may participate in various metabolic processes, including fermentation. The presence of P. vulgatus PC510 in the host-associated environment highlights the complex interactions that occur within microbial communities and their significance in maintaining host health. Further exploration of this bacterium's functional roles and interactions could yield insights into its contributions to nutrient metabolism and host immune modulation, underscoring the importance of anaerobic microbes in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainPC510

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus PC510
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus PC510 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1359298 bp

Thymine Count

1396111 bp

Guanine Count

1037487 bp

Cytosine Count

988803 bp

Genome Length

4781702 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-formyltetrahydrofolate cyclo-ligaseCUU_2992Not AvailableNegative3407984 - 340844417837.3
peptidase, s41 familyCUU_2993Not AvailableNegative3408437 - 341015863789.3
cytidine and deoxycytidylate deaminase zinc-binding regionCUU_2994Not AvailableNegative3410200 - 341063416211.4
putative lipoproteinCUU_2995Not AvailableNegative3410639 - 341113318544.7
peptidase family m3CUU_2996Not AvailableNegative3411147 - 341318977751.2
cyclic nucleotide-binding domain proteinCUU_2997Not AvailableNegative3413347 - 341402426004.6
conserved hypothetical protein tigr00427CUU_2998Not AvailablePositive3414212 - 341481422140.0
apbe family proteinCUU_2999Not AvailableNegative3414973 - 341596236710.1
membrane family proteinCUU_3000Not AvailableNegative3416002 - 341657421225.7
conserved hypothetical proteinCUU_3001Not AvailableNegative3416578 - 341722524461.2

Displaying genes 2761 – 2770 of 4019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.