Phocaeicola vulgatus PC510

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus PC510 is a Gram-positive, rod-shaped bacterium that typically exists in a single-cell arrangement and is classified as an anaerobe. This microbe is host-associated, suggesting a symbiotic relationship with its host organism, potentially contributing to the host's microbiome dynamics. As an anaerobic organism, P. vulgatus PC510 thrives in environments devoid of oxygen, which is characteristic of many gut-associated microbes. Understanding the specific conditions under which this bacterium operates can illuminate its role within the host's gastrointestinal tract, where it may participate in various metabolic processes, including fermentation. The presence of P. vulgatus PC510 in the host-associated environment highlights the complex interactions that occur within microbial communities and their significance in maintaining host health. Further exploration of this bacterium's functional roles and interactions could yield insights into its contributions to nutrient metabolism and host immune modulation, underscoring the importance of anaerobic microbes in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainPC510

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus PC510
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus PC510 contig00004, whole genome shotgun

Gene Summary

Adenine Count

1359298 bp

Thymine Count

1396111 bp

Guanine Count

1037487 bp

Cytosine Count

988803 bp

Genome Length

4781702 bp

Protein-coding Genes

3956 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnd transporter, hae1/hme family, permease proteinCUU_0985Not AvailableNegative2287398 - 2290478115328.0
efflux transporter, rnd family, mfp subunitCUU_0986Not AvailableNegative2290483 - 229155639435.6
o-antigen polymeraseCUU_0987Not AvailableNegative2291603 - 229325261896.2
putative lipoproteinCUU_0988Not AvailableNegative2293255 - 229516273809.5
signal peptidase iCUU_0989Not AvailableNegative2295177 - 229607934957.4
conserved hypothetical proteinCUU_0990Not AvailableNegative2296773 - 22969918106.64
hypothetical proteinCUU_0991Not AvailableNegative2297018 - 229799836897.0
conserved hypothetical proteinCUU_0992Not AvailableNegative2298176 - 22984339480.36
putative lipoproteinCUU_0993Not AvailableNegative2298641 - 229950733029.6
conserved hypothetical proteinCUU_0994Not AvailableNegative2299511 - 22997327943.79

Displaying genes 1921 – 1930 of 4019 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.