Pediococcus claussenii ATCC BAA-344

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Pediococcus

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPediococcus
SpeciesPediococcus claussenii
StrainATCC BAA-344

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbeer
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pediococcus claussenii ATCC BAA-344, complete sequence.

Gene Summary

Adenine Count

579996 bp

Thymine Count

575636 bp

Guanine Count

338545 bp

Cytosine Count

334934 bp

Genome Length

1829111 bp

Protein-coding Genes

1720 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyldiaminopimelate deacetylasePECL_RS00710Not AvailableNegative152444 - 15359542433.7
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferasePECL_RS00715Not AvailableNegative153610 - 15431724637.9
diaminopimelate decarboxylasePECL_RS00720Not AvailableNegative154344 - 15563646813.8
aspartate kinasePECL_RS00725Not AvailablePositive156102 - 15748451585.3
diaminopimelate epimerasePECL_RS00730Not AvailablePositive157477 - 15846636542.8
glycosyltransferasePECL_RS00735Not AvailablePositive159007 - 16004739875.3
hypothetical proteinPECL_RS10115Not AvailablePositive160064 - 1602406711.29
collagen binding domain-containing proteinPECL_RS00740Not AvailablePositive160244 - 16128739851.4
helix-turn-helix domain-containing proteinPECL_RS00745Not AvailablePositive161301 - 16277356845.2
enhanced intracellular survival protein eisPECL_RS00750Not AvailableNegative162893 - 16407445221.8

Displaying genes 161 – 170 of 1500 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

445 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 445 metabolites

Health Effects

No health effects information available for this bacterium.