Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halolamina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halolamina |
| Species | Halolamina pelagica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of wild grasses of hypersaline soil of the Rann of Kutch, Gujarat, India; Salterns of the Rann of Kutch, Gujarat, India |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
519369 bp
Thymine Count
520846 bp
Guanine Count
1059211 bp
Cytosine Count
1061207 bp
Genome Length
3160633 bp
Protein-coding Genes
3218 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05216277_106216 | Not Available | Negative | 2023196 - 2023843 | 23270.1 |
| dna topoisomerase-1 | SAMN05216277_106217 | Not Available | Positive | 2023925 - 2024692 | 26987.4 |
| pp_02078 | SAMN05216277_106218 | Not Available | Positive | 2024782 - 2025819 | Not Available |
| tryptophanyl-trna synthetase | SAMN05216277_106219 | Not Available | Positive | 2025833 - 2027434 | 59205.9 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05216277_106220 | Not Available | Positive | 2028189 - 2029694 | 55037.6 |
| phenylalanyl-trna synthetase beta subunit | SAMN05216277_106221 | Not Available | Positive | 2029694 - 2031508 | 66558.9 |
| valyl-trna synthetase | SAMN05216277_106222 | Not Available | Positive | 2031575 - 2034253 | 100984.0 |
| dihydroorotate oxidase a | SAMN05216277_106223 | Not Available | Negative | 2034271 - 2035326 | 36967.4 |
| hypothetical protein | SAMN05216277_106224 | Not Available | Negative | 2035331 - 2035528 | 7347.54 |
| nucleoid protein mc1 | SAMN05216277_106225 | Not Available | Positive | 2035742 - 2036047 | 11463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.