Halolamina pelagica

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halolamina

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalolamina
SpeciesHalolamina pelagica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere of wild grasses of hypersaline soil of the Rann of Kutch, Gujarat, India; Salterns of the Rann of Kutch, Gujarat, India
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halolamina pelagica strain CGMCC 1.10329 genome assembly, contig:

Gene Summary

Adenine Count

519369 bp

Thymine Count

520846 bp

Guanine Count

1059211 bp

Cytosine Count

1061207 bp

Genome Length

3160633 bp

Protein-coding Genes

3218 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05216277_103363Not AvailablePositive1269396 - 127021728357.3
rad3-related dna helicaseSAMN05216277_103364Not AvailablePositive1270269 - 127214368410.6
hypothetical proteinSAMN05216277_103365Not AvailablePositive1272254 - 127307230117.4
nonsense-mediated mrna decay protein 3SAMN05216277_103366Not AvailableNegative1273214 - 127432640915.4
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05216277_103367Not AvailableNegative1274768 - 127547825899.1
udp-glucose 4-epimeraseSAMN05216277_103368Not AvailableNegative1275549 - 127645432217.8
heat shock protein htpxSAMN05216277_103369Not AvailablePositive1276548 - 127742332054.3
hypothetical proteinSAMN05216277_103370Not AvailableNegative1277438 - 12776808196.09
hypothetical proteinSAMN05216277_103371Not AvailablePositive1277760 - 12779847794.62
atp-binding cassette, sub-family e, member 1SAMN05216277_1041Not AvailablePositive1278316 - 127866713517.7

Displaying genes 1311 – 1320 of 3262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.