Rhizobium tropici CIAT 899

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella tropici
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Lotus japonicus, Phaseolus vulgaris, Lotus burttii
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete

Gene Summary

Adenine Count

422046 bp

Thymine Count

424644 bp

Guanine Count

618254 bp

Cytosine Count

618252 bp

Genome Length

2083197 bp

Protein-coding Genes

1886 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2147 domain-containing proteinRTCIAT899_RS18965Not AvailablePositive74223 - 7458512849.4
duf2177 family proteinRTCIAT899_RS18970Not AvailablePositive74618 - 7503715199.8
tspo/mbr family proteinRTCIAT899_RS18975Not AvailableNegative75076 - 7557618851.6
sigma-70 family rna polymerase sigma factorRTCIAT899_RS18980Not AvailablePositive75712 - 7636524799.7
chrr family anti-sigma-e factorRTCIAT899_RS18985Not AvailablePositive76362 - 7701223031.8
pas domain-containing proteinRTCIAT899_RS18990Not AvailablePositive77365 - 7847441390.4
response regulatorRTCIAT899_RS18995Not AvailablePositive78489 - 7891115008.1
efflux rnd transporter permease subunitRTCIAT899_RS19000Not AvailableNegative79113 - 82271111955.0
efflux rnd transporter periplasmic adaptor subunitRTCIAT899_RS19005Not AvailableNegative82268 - 8346441678.9
sdr family nad(p)-dependent oxidoreductaseRTCIAT899_RS19010Not AvailableNegative84314 - 8500024137.2

Displaying genes 2501 – 2510 of 6384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0017277Adenosine phosphosulfateC10H14N5O10PSChemical structure of Adenosine phosphosulfate485-84-7
Average427.284Da
Monoisotopic427.019898895Da
BASm0017292Phosphoadenosine phosphosulfateC10H15N5O13P2SChemical structure of Phosphoadenosine phosphosulfate482-67-7
Average507.264Da
Monoisotopic506.986229305Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.