Rhizobium tropici CIAT 899

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella tropici
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Lotus japonicus, Phaseolus vulgaris, Lotus burttii
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete

Gene Summary

Adenine Count

422046 bp

Thymine Count

424644 bp

Guanine Count

618254 bp

Cytosine Count

618252 bp

Genome Length

2083197 bp

Protein-coding Genes

1886 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter atp-binding proteinRTCIAT899_RS23125Not AvailableNegative208783 - 20958328736.9
amino acid abc transporter permeaseRTCIAT899_RS23130Not AvailableNegative209588 - 21032826815.4
substrate-binding periplasmic proteinRTCIAT899_RS23135Not AvailableNegative210345 - 21126833482.0
gntr family transcriptional regulatorRTCIAT899_RS23140Not AvailablePositive211379 - 21206526550.2
type ii toxin-antitoxin system mrna interferase toxin, rele/stbe familyRTCIAT899_RS23145Not AvailableNegative212125 - 21241511054.5
copg family ribbon-helix-helix proteinRTCIAT899_RS23150Not AvailableNegative212412 - 2126578969.4
divalent metal cation transporterRTCIAT899_RS23155Not AvailableNegative212887 - 21357224714.6
divalent metal cation transporterRTCIAT899_RS33320Not AvailablePositive213616 - 2137444816.51
glycosyltransferase family 2 proteinRTCIAT899_RS23160Not AvailableNegative213781 - 21478237257.8
polysaccharide deacetylase family proteinRTCIAT899_RS23165Not AvailableNegative214789 - 21549026331.6

Displaying genes 181 – 190 of 6384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0017277Adenosine phosphosulfateC10H14N5O10PSChemical structure of Adenosine phosphosulfate485-84-7
Average427.284Da
Monoisotopic427.019898895Da
BASm0017292Phosphoadenosine phosphosulfateC10H15N5O13P2SChemical structure of Phosphoadenosine phosphosulfate482-67-7
Average507.264Da
Monoisotopic506.986229305Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.