Rhizobium tropici CIAT 899

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella tropici
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Lotus japonicus, Phaseolus vulgaris, Lotus burttii
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete

Gene Summary

Adenine Count

422046 bp

Thymine Count

424644 bp

Guanine Count

618254 bp

Cytosine Count

618252 bp

Genome Length

2083197 bp

Protein-coding Genes

1886 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitRTCIAT899_RS22720Not AvailablePositive113798 - 116896109711.0
abc transporter substrate-binding proteinRTCIAT899_RS22725Not AvailablePositive117144 - 11815735916.2
alkaline phosphatase family proteinRTCIAT899_RS22730Not AvailableNegative118539 - 12006253624.0
hypothetical proteinRTCIAT899_RS33560Not AvailableNegative120375 - 1205155202.26
cupin domain-containing proteinRTCIAT899_RS22735Not AvailableNegative120555 - 12101916882.0
mfs transporterRTCIAT899_RS22740Not AvailableNegative121032 - 12220739988.2
ester cyclaseRTCIAT899_RS22745Not AvailableNegative122557 - 12309619193.8
voc family proteinRTCIAT899_RS22750Not AvailableNegative123121 - 12349514074.8
sdr family oxidoreductaseRTCIAT899_RS22755Not AvailableNegative123500 - 12421324333.1
lysr family transcriptional regulatorRTCIAT899_RS22760Not AvailablePositive124318 - 12521432833.5

Displaying genes 101 – 110 of 6384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002749ADP-alpha-D-glucoseC16H23N5O15P2Chemical structure of ADP-alpha-D-glucoseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0017277Adenosine phosphosulfateC10H14N5O10PSChemical structure of Adenosine phosphosulfate485-84-7
Average427.284Da
Monoisotopic427.019898895Da
BASm0017292Phosphoadenosine phosphosulfateC10H15N5O13P2SChemical structure of Phosphoadenosine phosphosulfate482-67-7
Average507.264Da
Monoisotopic506.986229305Da

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.