Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | PFRI_09320 | Not Available | Negative | 942672 - 943289 | 22104.1 |
| 50s ribosomal protein l3 | PFRI_09330 | Not Available | Negative | 943286 - 944011 | 25228.5 |
| 30s ribosomal protein s10 | PFRI_09340 | Not Available | Negative | 944027 - 944338 | 11566.1 |
| hypothetical protein | PFRI_09350 | Not Available | Negative | 944504 - 945631 | 40839.2 |
| hypothetical protein | PFRI_09360 | Not Available | Positive | 945864 - 946769 | 30337.4 |
| 30s ribosomal protein s2 | PFRI_09370 | Not Available | Positive | 946925 - 947716 | 28239.0 |
| elongation factor ts | PFRI_09380 | Not Available | Positive | 947788 - 948663 | 30009.3 |
| hypothetical protein | PFRI_09390 | Not Available | Positive | 948811 - 949503 | 25528.9 |
| tn3 transposase dde domain protein | PFRI_09400 | Not Available | Negative | 949860 - 952484 | 99096.4 |
| hypothetical protein | PFRI_09410 | Not Available | Negative | 952590 - 952868 | 10733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
