Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional purine biosynthesis protein purh | PFRI_09120 | Not Available | Negative | 927884 - 929473 | 55649.1 |
| heparinase ii/iii-like protein | PFRI_09130 | Not Available | Negative | 929492 - 931234 | 63226.9 |
| ribosomal rna small subunit methyltransferase b | PFRI_09140 | Not Available | Negative | 931322 - 932593 | 45284.6 |
| hypothetical protein | PFRI_09150 | Not Available | Positive | 932675 - 932854 | 6489.58 |
| hypothetical protein | PFRI_09160 | Not Available | Negative | 932859 - 933209 | 12748.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | PFRI_09170 | Not Available | Negative | 933323 - 934132 | 28152.7 |
| ribosome-binding factor a | PFRI_09180 | Not Available | Positive | 934216 - 934638 | 16102.2 |
| hypothetical protein | PFRI_09190 | Not Available | Positive | 934635 - 935372 | 27085.1 |
| trna pseudouridine synthase b | PFRI_09200 | Not Available | Positive | 935443 - 936357 | 32833.9 |
| glyoxalase-like domain protein | PFRI_09210 | Not Available | Negative | 936354 - 936722 | 13267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
