Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_08920 | Not Available | Negative | 906180 - 906932 | 27998.6 |
| hypothetical protein | PFRI_08930 | Not Available | Negative | 906929 - 908230 | 47731.5 |
| ecf rna polymerase sigma factor rpoe | PFRI_08940 | Not Available | Positive | 908466 - 909005 | 20342.3 |
| anti-sigma-e factor chrr | PFRI_08950 | Not Available | Positive | 909005 - 909658 | 23230.8 |
| snoal-like domain protein | PFRI_08960 | Not Available | Negative | 909655 - 910005 | 13305.6 |
| dna recombination protein rmuc | PFRI_08970 | Not Available | Negative | 909995 - 911155 | 42321.0 |
| dna mismatch repair protein mutl | PFRI_08980 | Not Available | Negative | 911155 - 912984 | 65526.3 |
| ammonium transporter nrga | PFRI_08990 | Not Available | Negative | 913099 - 914421 | 46318.9 |
| nitrogen regulatory protein p-ii 1 | PFRI_09000 | Not Available | Negative | 914446 - 914784 | 12151.8 |
| penicillin-binding protein 2d | PFRI_09010 | Not Available | Positive | 915031 - 917226 | 78982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
