Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | PFRI_08820 | Not Available | Positive | 895396 - 896508 | 40737.7 |
| dna gyrase subunit b | PFRI_08830 | Not Available | Positive | 896599 - 899016 | 89540.5 |
| hypothetical protein | PFRI_08840 | Not Available | Positive | 899006 - 899437 | 15407.9 |
| n-carbamoyl-l-amino acid hydrolase | PFRI_08850 | Not Available | Negative | 899434 - 900630 | 42623.8 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | PFRI_08860 | Not Available | Positive | 900727 - 901386 | 24469.6 |
| alanine dehydrogenase | PFRI_08870 | Not Available | Positive | 901399 - 902445 | 37478.4 |
| lysine 6-dehydrogenase | PFRI_08880 | Not Available | Positive | 902458 - 903597 | 41936.7 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PFRI_08890 | Not Available | Negative | 903637 - 904368 | 26501.9 |
| hypothetical protein | PFRI_08900 | Not Available | Negative | 904365 - 904928 | 20864.9 |
| major facilitator superfamily protein | PFRI_08910 | Not Available | Negative | 904933 - 906180 | 43633.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
