Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_08720 | Not Available | Negative | 885180 - 885965 | 30268.6 |
| flagellar hook-length control protein flik | PFRI_08730 | Not Available | Positive | 886078 - 887118 | 37240.7 |
| basal-body rod modification protein flgd | PFRI_08740 | Not Available | Positive | 887122 - 887796 | 23733.7 |
| putative protein kinase ubib | PFRI_08750 | Not Available | Negative | 887793 - 889328 | 56181.1 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | PFRI_08760 | Not Available | Negative | 889332 - 890084 | 28048.7 |
| formamidopyrimidine-dna glycosylase | PFRI_08770 | Not Available | Positive | 890186 - 891037 | 31390.8 |
| putative enoyl-coa hydratase echa8 | PFRI_08780 | Not Available | Positive | 891102 - 891878 | 28281.2 |
| 30s ribosomal protein s20 | PFRI_08790 | Not Available | Positive | 891976 - 892239 | 9764.91 |
| chromosomal replication initiator protein dnaa | PFRI_08800 | Not Available | Positive | 892775 - 894151 | 51460.1 |
| dna polymerase iii subunit beta | PFRI_08810 | Not Available | Positive | 894268 - 895386 | 40661.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
