Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_08620 | Not Available | Positive | 872271 - 872597 | 10086.3 |
| c4-dicarboxylate-binding periplasmic protein precursor | PFRI_08630 | Not Available | Positive | 872870 - 873871 | 36338.9 |
| 2,3-diketo-l-gulonate trap transporter small permease protein yiam | PFRI_08640 | Not Available | Positive | 873960 - 874640 | 25217.7 |
| sialic acid trap transporter permease protein siat | PFRI_08650 | Not Available | Positive | 874644 - 876020 | 48416.6 |
| tetratricopeptide repeat protein | PFRI_08660 | Not Available | Negative | 876713 - 879211 | 92478.5 |
| gscfa family protein | PFRI_08670 | Not Available | Negative | 879273 - 880247 | 37100.0 |
| hypothetical protein | PFRI_08680 | Not Available | Negative | 880829 - 881581 | 27119.1 |
| adp-ribosylglycohydrolase | PFRI_08690 | Not Available | Negative | 882057 - 882971 | 31974.5 |
| hypothetical protein | PFRI_08700 | Not Available | Negative | 882949 - 883329 | 13650.2 |
| 6-aminohexanoate-dimer hydrolase | PFRI_08710 | Not Available | Negative | 883934 - 885097 | 42351.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
