Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferases group 1 | PFRI_08520 | Not Available | Positive | 860007 - 861245 | 46301.8 |
| hypothetical protein | PFRI_08530 | Not Available | Positive | 861292 - 862302 | 39940.7 |
| core-2/i-branching enzyme | PFRI_08540 | Not Available | Positive | 862317 - 863996 | 64476.0 |
| hypothetical protein | PFRI_08550 | Not Available | Positive | 864000 - 865418 | 53294.3 |
| branched-chain-amino-acid aminotransferase | PFRI_08560 | Not Available | Positive | 865424 - 866341 | 33600.9 |
| putative acetyl-hydrolase lipr precursor | PFRI_08570 | Not Available | Negative | 866338 - 867198 | 31458.4 |
| hth-type transcriptional repressor nemr | PFRI_08580 | Not Available | Positive | 867549 - 868181 | 23368.0 |
| organic hydroperoxide resistance protein ohrb | PFRI_08590 | Not Available | Positive | 868178 - 868528 | 12114.4 |
| nadph-dependent curcumin reductase | PFRI_08600 | Not Available | Positive | 868604 - 869638 | 36233.5 |
| long-chain-fatty-acid--coa ligase | PFRI_08610 | Not Available | Positive | 869723 - 871585 | 65547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
