Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_00390 | Not Available | Negative | 36266 - 38701 | 89275.8 |
| hth-type transcriptional regulator beti | PFRI_00400 | Not Available | Negative | 39253 - 39873 | 22426.7 |
| thymidylate kinase | PFRI_00410 | Not Available | Negative | 39866 - 40735 | 33943.1 |
| dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system | PFRI_00420 | Not Available | Negative | 40784 - 41734 | 33890.9 |
| homoserine o-succinyltransferase | PFRI_00430 | Not Available | Negative | 41727 - 42644 | 35042.5 |
| hypothetical protein | PFRI_00440 | Not Available | Negative | 42684 - 43556 | 33195.2 |
| putative dmt superfamily transporter inner membrane protein | PFRI_00450 | Not Available | Negative | 43593 - 44504 | 32351.9 |
| riboflavin transporter | PFRI_00460 | Not Available | Negative | 44536 - 45420 | 31592.5 |
| gmp synthase | PFRI_00470 | Not Available | Negative | 45452 - 47026 | 57485.4 |
| trimethylamine methyltransferase (mttb) | PFRI_00480 | Not Available | Positive | 47212 - 48759 | 55809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
