Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cca-adding enzyme | PFRI_08120 | Not Available | Positive | 819268 - 820413 | 41268.4 |
| cysteine/o-acetylserine efflux protein | PFRI_08130 | Not Available | Positive | 820410 - 820997 | 21297.8 |
| putative multidrug export atp-binding/permease protein | PFRI_08140 | Not Available | Positive | 821018 - 822859 | 67501.1 |
| putative multidrug export atp-binding/permease protein | PFRI_08150 | Not Available | Positive | 822856 - 824694 | 66284.1 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | PFRI_08160 | Not Available | Positive | 824710 - 825936 | 44530.8 |
| ion transport protein | PFRI_08170 | Not Available | Positive | 825953 - 826744 | 28979.1 |
| l,d-transpeptidase catalytic domain | PFRI_08180 | Not Available | Positive | 826823 - 827317 | 18308.1 |
| cysteine-rich secretory protein family protein | PFRI_08190 | Not Available | Negative | 827318 - 827863 | 19712.5 |
| putative l,d-transpeptidase erfk/srfk precursor | PFRI_08200 | Not Available | Positive | 828030 - 828656 | 23012.3 |
| hypothetical protein | PFRI_08210 | Not Available | Negative | 828722 - 828937 | 7711.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
