Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid trap transporter permease protein siat | PFRI_08020 | Not Available | Positive | 808665 - 809177 | 19892.6 |
| sialic acid trap transporter permease protein siat | PFRI_08030 | Not Available | Positive | 809189 - 810517 | 46402.9 |
| hypothetical protein | PFRI_08040 | Not Available | Positive | 810978 - 811229 | 10070.8 |
| type i secretion system membrane fusion protein prse | PFRI_08050 | Not Available | Negative | 811300 - 812583 | 47135.2 |
| toxin rtx-i translocation atp-binding protein | PFRI_08060 | Not Available | Negative | 812585 - 814708 | 76403.1 |
| outer membrane efflux protein | PFRI_08070 | Not Available | Negative | 814705 - 815433 | 26519.6 |
| transcriptional regulatory protein yycf | PFRI_08080 | Not Available | Positive | 815918 - 817195 | 46577.9 |
| rna pyrophosphohydrolase | PFRI_08090 | Not Available | Negative | 817182 - 817631 | 17201.8 |
| 33 kda chaperonin | PFRI_08100 | Not Available | Positive | 817702 - 818679 | 35459.7 |
| putative nudix hydrolase nudl | PFRI_08110 | Not Available | Positive | 818672 - 819271 | 22293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
