Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | PFRI_07820 | Not Available | Positive | 791571 - 792413 | 30544.0 |
| 30s ribosomal protein s19 | PFRI_07830 | Not Available | Positive | 792417 - 792695 | 10522.6 |
| 50s ribosomal protein l22 | PFRI_07840 | Not Available | Positive | 792699 - 793079 | 14198.5 |
| 30s ribosomal protein s3 | PFRI_07850 | Not Available | Positive | 793079 - 793786 | 26494.2 |
| 50s ribosomal protein l16 | PFRI_07860 | Not Available | Positive | 793799 - 794212 | 15537.2 |
| mlta-interacting protein mipa | PFRI_07870 | Not Available | Negative | 794368 - 795138 | 26496.5 |
| hypothetical protein | PFRI_07880 | Not Available | Positive | 795258 - 795995 | 27100.9 |
| cytochrome p450-pinf2, plant-inducible | PFRI_07890 | Not Available | Positive | 796173 - 796382 | 7881.68 |
| haloacetate dehalogenase h-2 | PFRI_07900 | Not Available | Positive | 796547 - 797227 | 25163.9 |
| hypothetical protein | PFRI_07910 | Not Available | Positive | 797296 - 798240 | 34671.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
