Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | PFRI_07720 | Not Available | Positive | 782843 - 783043 | 7774.57 |
| major facilitator superfamily protein | PFRI_07730 | Not Available | Negative | 783181 - 784440 | 45612.2 |
| pkhd-type hydroxylase ybix | PFRI_07740 | Not Available | Positive | 784674 - 785222 | 20055.8 |
| hypothetical protein | PFRI_07750 | Not Available | Positive | 785381 - 785599 | 8229.7 |
| asp/glu/hydantoin racemase | PFRI_07760 | Not Available | Negative | 786336 - 787007 | 22949.7 |
| sialic acid trap transporter permease protein siat | PFRI_07770 | Not Available | Negative | 787007 - 788293 | 45054.3 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_07780 | Not Available | Negative | 788293 - 788814 | 18715.5 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PFRI_07790 | Not Available | Negative | 788835 - 789815 | 35098.4 |
| dna-binding transcriptional regulator hexr | PFRI_07800 | Not Available | Negative | 790034 - 790903 | 31023.7 |
| hypothetical protein | PFRI_07810 | Not Available | Negative | 791176 - 791340 | 6516.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
