Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_07620 | Not Available | Positive | 774971 - 775657 | 24930.3 |
| hypothetical protein | PFRI_07630 | Not Available | Positive | 776042 - 776404 | 13174.1 |
| hypothetical protein | PFRI_07640 | Not Available | Negative | 776407 - 776880 | 17599.9 |
| 6,7-dimethyl-8-ribityllumazine synthase 1 | PFRI_07650 | Not Available | Negative | 776877 - 777428 | 19239.9 |
| riboflavin biosynthesis protein ribba | PFRI_07660 | Not Available | Negative | 777428 - 778552 | 40182.1 |
| hypothetical protein | PFRI_07670 | Not Available | Negative | 778623 - 778925 | 11271.9 |
| 23s rrna (guanosine-2'-o-)-methyltransferase rlmb | PFRI_07680 | Not Available | Negative | 779015 - 779794 | 27945.6 |
| Trna-pseudo | Not Available | Not Available | Positive | 779928 - 780011 | Not Available |
| hypothetical protein | PFRI_07700 | Not Available | Positive | 780253 - 780942 | 26362.3 |
| peptidase family s58 | PFRI_07710 | Not Available | Negative | 781143 - 782276 | 39987.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
