Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_00290 | Not Available | Positive | 26345 - 26860 | 18815.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PFRI_00300 | Not Available | Negative | 26983 - 27384 | 14215.2 |
| 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | PFRI_00310 | Not Available | Negative | 27472 - 27690 | 7005.35 |
| nad dependent epimerase/dehydratase family protein | PFRI_00320 | Not Available | Negative | 27706 - 28542 | 30115.6 |
| aspartate aminotransferase | PFRI_00330 | Not Available | Negative | 28555 - 29454 | 31227.4 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | PFRI_00340 | Not Available | Negative | 29451 - 30224 | 27420.9 |
| d-amino acid dehydrogenase small subunit | PFRI_00350 | Not Available | Negative | 30417 - 31433 | 37488.0 |
| acetophenone carboxylase delta subunit | PFRI_00360 | Not Available | Negative | 31433 - 33142 | 60468.6 |
| acetophenone carboxylase gamma subunit | PFRI_00370 | Not Available | Negative | 33139 - 35265 | 76496.5 |
| hydrogen peroxide-inducible protein activator | PFRI_00380 | Not Available | Negative | 35357 - 36265 | 33197.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
