Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | PFRI_07320 | Not Available | Negative | 747214 - 748440 | 47999.9 |
| hypothetical protein | PFRI_07330 | Not Available | Positive | 748722 - 748997 | 10035.8 |
| atp-dependent dna helicase recq | PFRI_07340 | Not Available | Positive | 749007 - 750689 | 63551.3 |
| hypothetical protein | PFRI_07350 | Not Available | Positive | 750803 - 750946 | 5217.56 |
| Trna-phe | Not Available | Not Available | Positive | 751284 - 751358 | Not Available |
| dna gyrase inhibitor yacg | PFRI_07370 | Not Available | Negative | 751436 - 751642 | 7516.68 |
| ribonuclease g | PFRI_07380 | Not Available | Negative | 751639 - 752661 | 36543.7 |
| maf-like protein yhde | PFRI_07390 | Not Available | Negative | 752658 - 753236 | 20550.9 |
| translation initiation factor if-1 | PFRI_07400 | Not Available | Negative | 753303 - 753521 | 8201.07 |
| (r)-stereoselective amidase | PFRI_07410 | Not Available | Negative | 753604 - 754506 | 32417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
