Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_06920 | Not Available | Positive | 708479 - 708892 | 15780.4 |
| biotin transporter bioy | PFRI_06930 | Not Available | Positive | 708996 - 709595 | 20972.7 |
| alpha/beta hydrolase family protein | PFRI_06940 | Not Available | Negative | 709657 - 710862 | 42846.1 |
| hypothetical protein | PFRI_06950 | Not Available | Positive | 711024 - 711569 | 20316.1 |
| hypothetical protein | PFRI_06960 | Not Available | Negative | 712002 - 712091 | 3100.81 |
| acetate operon repressor | PFRI_06970 | Not Available | Negative | 712188 - 712979 | 28782.6 |
| fumarylacetoacetate (faa) hydrolase family protein | PFRI_06980 | Not Available | Negative | 713016 - 713996 | 35192.8 |
| 3-(3-hydroxy-phenyl)propionate/3- hydroxycinnamic acid hydroxylase | PFRI_06990 | Not Available | Negative | 713993 - 715501 | 55601.6 |
| biphenyl-2,3-diol 1,2-dioxygenase | PFRI_07000 | Not Available | Negative | 715504 - 716478 | 36235.9 |
| hypothetical protein | PFRI_07010 | Not Available | Positive | 716643 - 716885 | 9402.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
