Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_06620 | Not Available | Positive | 675666 - 678071 | 87873.6 |
| trimethylamine methyltransferase (mttb) | PFRI_06630 | Not Available | Positive | 678068 - 679588 | 54462.9 |
| hypothetical protein | PFRI_06640 | Not Available | Positive | 679704 - 680000 | 8768.64 |
| acetate operon repressor | PFRI_06650 | Not Available | Negative | 680086 - 680865 | 28719.7 |
| sialic acid trap transporter permease protein siat | PFRI_06660 | Not Available | Negative | 680874 - 682232 | 47693.9 |
| tripartite atp-independent periplasmic transporter, dctq component | PFRI_06670 | Not Available | Negative | 682232 - 683077 | 31955.8 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | PFRI_06680 | Not Available | Negative | 683198 - 684430 | 45793.8 |
| alcohol dehydrogenase | PFRI_06690 | Not Available | Positive | 684541 - 686133 | 57976.9 |
| abc transporter, phosphonate, periplasmic substrate-binding protein | PFRI_06700 | Not Available | Positive | 686206 - 686958 | 27803.4 |
| alkane 1-monooxygenase 2 | PFRI_06710 | Not Available | Negative | 687062 - 688195 | 43833.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
