Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine/isoleucine/valine transporter permease subunit | PFRI_00190 | Not Available | Positive | 18109 - 19044 | 33170.4 |
| lipopolysaccharide export system atp-binding protein lptb | PFRI_00200 | Not Available | Positive | 19046 - 19777 | 26111.8 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PFRI_00210 | Not Available | Positive | 19770 - 20900 | 40484.2 |
| putative aldehyde dehydrogenase yfmt | PFRI_00220 | Not Available | Positive | 20902 - 22368 | 52489.8 |
| 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase | PFRI_00230 | Not Available | Positive | 22331 - 23176 | 30024.2 |
| inner membrane protein yqik | PFRI_00240 | Not Available | Positive | 23190 - 24755 | 56039.8 |
| hypothetical protein | PFRI_00250 | Not Available | Positive | 24700 - 24846 | 5586.9 |
| hypothetical protein | PFRI_00260 | Not Available | Negative | 25045 - 25299 | 9278.68 |
| putative transposase | PFRI_00270 | Not Available | Negative | 25296 - 26057 | 28536.9 |
| hypothetical protein | PFRI_00280 | Not Available | Positive | 26212 - 26328 | 4090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
