Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sulfoacetate--coa ligase | PFRI_05890 | Not Available | Positive | 604321 - 605442 | 40672.6 |
| surfactin synthase subunit 3 | PFRI_05900 | Not Available | Positive | 605423 - 607039 | 58801.9 |
| 6-deoxyerythronolide b hydroxylase | PFRI_05910 | Not Available | Negative | 607058 - 608248 | 43396.2 |
| hypothetical protein | PFRI_05920 | Not Available | Negative | 608202 - 609311 | 40884.5 |
| hypothetical protein | PFRI_05930 | Not Available | Positive | 610553 - 611128 | 19535.7 |
| hypothetical protein | PFRI_05940 | Not Available | Negative | 611232 - 612440 | 45973.7 |
| hypothetical protein | PFRI_05950 | Not Available | Negative | 612525 - 612659 | 4560.45 |
| hypothetical protein | PFRI_05960 | Not Available | Negative | 612833 - 613588 | 27460.2 |
| ribonuclease i | PFRI_05970 | Not Available | Positive | 613718 - 614350 | 23530.2 |
| phthiocerol synthesis polyketide synthase type i ppsc | PFRI_05980 | Not Available | Negative | 614403 - 615374 | 33967.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
