Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFRI_05590 | Not Available | Positive | 570717 - 571364 | 23128.8 |
| lysozyme m1 precursor | PFRI_05600 | Not Available | Positive | 571371 - 572135 | 29461.2 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | PFRI_05610 | Not Available | Negative | 572169 - 574670 | 92509.4 |
| hypothetical protein | PFRI_05620 | Not Available | Negative | 574783 - 575076 | 10489.6 |
| gamma-glutamyltranspeptidase precursor | PFRI_05630 | Not Available | Negative | 575326 - 577074 | 61689.6 |
| glycerate dehydrogenase | PFRI_05640 | Not Available | Negative | 577097 - 578083 | 35687.5 |
| bacterial sh3 domain protein | PFRI_05650 | Not Available | Positive | 578201 - 578698 | 18384.4 |
| hypothetical protein | PFRI_05660 | Not Available | Negative | 578788 - 579666 | 30920.1 |
| cyclohexadienyl dehydrogenase | PFRI_05670 | Not Available | Negative | 579663 - 580577 | 33008.1 |
| histidinol-phosphate aminotransferase 2 | PFRI_05680 | Not Available | Negative | 580574 - 581659 | 38463.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
