Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactose transport system permease protein lacf | PFRI_00090 | Not Available | Positive | 8024 - 8917 | 33381.1 |
| l-arabinose transport system permease protein araq | PFRI_00100 | Not Available | Positive | 8914 - 9723 | 29906.3 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | PFRI_00110 | Not Available | Positive | 9720 - 10511 | 28406.3 |
| na cotransporter | PFRI_00120 | Not Available | Positive | 10540 - 12195 | 59022.4 |
| hypothetical protein | PFRI_00130 | Not Available | Positive | 12356 - 12697 | 13032.1 |
| tyrosine recombinase xerc | PFRI_00140 | Not Available | Positive | 12834 - 12989 | 5774.17 |
| hth-type transcriptional activator rhas | PFRI_00150 | Not Available | Negative | 13489 - 14409 | 34030.7 |
| vanillin dehydrogenase | PFRI_00160 | Not Available | Positive | 14552 - 15937 | 49235.3 |
| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor | PFRI_00170 | Not Available | Positive | 15989 - 17188 | 42133.6 |
| high-affinity branched-chain amino acid transport system permease protein livh | PFRI_00180 | Not Available | Positive | 17246 - 18112 | 30303.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
