Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | PFRI_05290 | Not Available | Positive | 531731 - 534058 | 84460.4 |
| murein hydrolase activator nlpd precursor | PFRI_05300 | Not Available | Positive | 534058 - 535020 | 35401.4 |
| chromosome partition protein smc | PFRI_05310 | Not Available | Negative | 535021 - 537324 | 82743.7 |
| hypothetical protein | PFRI_05320 | Not Available | Negative | 537324 - 538538 | 43476.8 |
| chac-like protein | PFRI_05330 | Not Available | Negative | 538606 - 539133 | 19715.4 |
| hypothetical protein | PFRI_05340 | Not Available | Positive | 539192 - 540190 | 35893.3 |
| 6,7-dimethyl-8-ribityllumazine synthase 2 | PFRI_05350 | Not Available | Negative | 540199 - 540636 | 15771.8 |
| succinyl-diaminopimelate desuccinylase | PFRI_05360 | Not Available | Positive | 540928 - 542217 | 47116.0 |
| chaperone protein dnak | PFRI_05370 | Not Available | Negative | 542283 - 543536 | 45232.1 |
| glutathione-binding protein gsib precursor | PFRI_05380 | Not Available | Positive | 543669 - 545147 | 52927.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
