Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PFRI_04990 | Not Available | Negative | 495367 - 496635 | 44215.9 |
| hypothetical protein | PFRI_05000 | Not Available | Negative | 496663 - 496836 | 6230.22 |
| Trna-thr | Not Available | Not Available | Positive | 496923 - 496997 | Not Available |
| hth-type transcriptional regulator lutr | PFRI_05020 | Not Available | Negative | 497440 - 498159 | 26483.6 |
| leu/ile/val-binding protein precursor | PFRI_05030 | Not Available | Positive | 498386 - 499573 | 42248.0 |
| high-affinity branched-chain amino acid transport system permease protein livh | PFRI_05040 | Not Available | Positive | 499660 - 500529 | 31058.6 |
| high-affinity branched-chain amino acid transport system permease protein livh | PFRI_05050 | Not Available | Positive | 500534 - 501514 | 35292.4 |
| lipopolysaccharide export system atp-binding protein lptb | PFRI_05060 | Not Available | Positive | 501511 - 502293 | 28386.1 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | PFRI_05070 | Not Available | Positive | 502297 - 503019 | 25914.6 |
| asp/glu/hydantoin racemase | PFRI_05080 | Not Available | Positive | 503026 - 503712 | 24083.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
