Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | PFRI_04790 | Not Available | Positive | 478766 - 480061 | 45976.7 |
| soluble epoxide hydrolase | PFRI_04800 | Not Available | Positive | 480096 - 480965 | 32105.1 |
| hypothetical protein | PFRI_04810 | Not Available | Positive | 481123 - 481365 | 8831.83 |
| hypothetical protein | PFRI_04820 | Not Available | Positive | 481589 - 481783 | 6940.64 |
| putative transposase | PFRI_04830 | Not Available | Negative | 481728 - 482675 | 35380.3 |
| formamidase | PFRI_04840 | Not Available | Negative | 482781 - 483752 | 34911.0 |
| scyllo-inositol 2-dehydrogenase | PFRI_04850 | Not Available | Negative | 483763 - 484731 | 34446.9 |
| hypothetical protein | PFRI_04860 | Not Available | Positive | 485017 - 485493 | 17770.6 |
| ribosomal protein s6--l-glutamate ligase | PFRI_04870 | Not Available | Positive | 485490 - 486395 | 32432.6 |
| n-alpha-acetyl-l-2,4-diaminobutyric acid deacetylase | PFRI_04880 | Not Available | Positive | 486392 - 487438 | 37697.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
