Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain protein | PFRI_04590 | Not Available | Positive | 464308 - 465045 | 27025.1 |
| putative gtp-binding protein engb | PFRI_04600 | Not Available | Positive | 465042 - 465695 | 23820.8 |
| hypothetical protein | PFRI_04610 | Not Available | Positive | 465774 - 465893 | 4398.29 |
| phage integrase family protein | PFRI_04620 | Not Available | Positive | 466363 - 467466 | 41099.5 |
| Trna-met | Not Available | Not Available | Positive | 467489 - 467565 | Not Available |
| phosphoribosylformylglycinamidine cyclo-ligase | PFRI_04640 | Not Available | Positive | 467674 - 468726 | 36405.3 |
| phosphoribosylglycinamide formyltransferase | PFRI_04650 | Not Available | Positive | 468723 - 469295 | 20645.1 |
| ribonuclease d | PFRI_04660 | Not Available | Positive | 469386 - 470543 | 43035.5 |
| hypothetical protein | PFRI_04670 | Not Available | Negative | 470550 - 471068 | 18629.3 |
| cysteine desulfuration protein sufe | PFRI_04680 | Not Available | Positive | 471193 - 471603 | 14868.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
