Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative methyltransferase ycgj | PFRI_04490 | Not Available | Negative | 453515 - 454147 | 23132.1 |
| hth-type transcriptional regulator catm | PFRI_04500 | Not Available | Positive | 454181 - 455128 | 34709.0 |
| cytochrome p450-pinf2, plant-inducible | PFRI_04510 | Not Available | Positive | 455152 - 456324 | 43497.4 |
| cysteine/o-acetylserine efflux protein | PFRI_04520 | Not Available | Positive | 456365 - 456727 | 13213.6 |
| tyrosine recombinase xerc | PFRI_04530 | Not Available | Positive | 456843 - 457730 | 33218.4 |
| hypothetical protein | PFRI_04540 | Not Available | Negative | 457715 - 457921 | 7034.58 |
| regulatory protein sdia | PFRI_04550 | Not Available | Negative | 458393 - 459100 | 26537.8 |
| glutamate--cysteine ligase gsha | PFRI_04560 | Not Available | Negative | 459214 - 460584 | 50375.8 |
| oxygen sensor protein dosp | PFRI_04570 | Not Available | Positive | 460850 - 462382 | 56541.7 |
| membrane protein insertase yidc | PFRI_04580 | Not Available | Positive | 462506 - 464308 | 66107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
