Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor lldr | PFRI_04390 | Not Available | Positive | 443116 - 443811 | 25597.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | PFRI_04400 | Not Available | Positive | 443808 - 444716 | 33438.7 |
| aldehyde dehydrogenase puuc | PFRI_04410 | Not Available | Positive | 444713 - 446203 | 52836.9 |
| pyrroline-5-carboxylate reductase | PFRI_04420 | Not Available | Positive | 446200 - 446961 | 26680.0 |
| trimethylamine methyltransferase (mttb) | PFRI_04430 | Not Available | Positive | 446958 - 448508 | 57273.3 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PFRI_04440 | Not Available | Positive | 448560 - 449273 | 24585.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | PFRI_04450 | Not Available | Positive | 449270 - 450001 | 25635.6 |
| gamma-glutamylputrescine oxidoreductase | PFRI_04460 | Not Available | Positive | 449998 - 451323 | 47635.4 |
| taurine--pyruvate aminotransferase | PFRI_04470 | Not Available | Positive | 451477 - 452868 | 50351.9 |
| hypothetical protein | PFRI_04480 | Not Available | Positive | 453018 - 453518 | 18786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
