Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dmt superfamily transporter inner membrane protein | PFRI_04090 | Not Available | Negative | 411895 - 412770 | 30641.8 |
| dna-binding protein hrm | PFRI_04100 | Not Available | Negative | 412845 - 413132 | 9955.35 |
| amp nucleosidase | PFRI_04110 | Not Available | Negative | 413265 - 414737 | 54359.7 |
| adenine deaminase | PFRI_04120 | Not Available | Negative | 414757 - 416553 | 63518.1 |
| glyoxalase-like domain protein | PFRI_04130 | Not Available | Positive | 416621 - 417064 | 15595.3 |
| decarboxylase novr | PFRI_04140 | Not Available | Positive | 417061 - 417813 | 28095.9 |
| fatty acid hydroxylase superfamily protein | PFRI_04150 | Not Available | Positive | 417826 - 418803 | 38063.2 |
| trans-aconitate 2-methyltransferase | PFRI_04160 | Not Available | Negative | 418800 - 419426 | 22423.4 |
| hypothetical protein | PFRI_04170 | Not Available | Positive | 419492 - 420361 | 31288.5 |
| transcriptional repressor paax | PFRI_04180 | Not Available | Negative | 420304 - 421143 | 30636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
