Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-formylglutathione hydrolase | PFRI_03990 | Not Available | Negative | 404740 - 405570 | 30379.6 |
| putative transporter yfdv | PFRI_04000 | Not Available | Negative | 405601 - 406530 | 32654.9 |
| putative hth-type transcriptional regulator yfir | PFRI_04010 | Not Available | Positive | 406710 - 407327 | 22463.8 |
| hypothetical protein | PFRI_04020 | Not Available | Negative | 407343 - 407555 | 7967.79 |
| dual-specificity rna methyltransferase rlmn | PFRI_04030 | Not Available | Negative | 407723 - 408898 | 43642.7 |
| hypothetical protein | PFRI_04040 | Not Available | Negative | 409009 - 409536 | 18723.9 |
| l-asparaginase ii | PFRI_04050 | Not Available | Positive | 409712 - 410710 | 35017.0 |
| hypothetical protein | PFRI_04060 | Not Available | Negative | 410707 - 410937 | 8442.16 |
| hypothetical protein | PFRI_04070 | Not Available | Negative | 410934 - 411119 | 6511.14 |
| thiol:disulfide interchange protein dsbd | PFRI_04080 | Not Available | Negative | 411144 - 411857 | 24628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
