Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine import atp-binding protein pota | PFRI_03690 | Not Available | Negative | 367868 - 368881 | 36000.5 |
| inner membrane abc transporter permease protein ydcv | PFRI_03700 | Not Available | Negative | 368874 - 369650 | 27595.6 |
| putrescine transport system permease protein poth | PFRI_03710 | Not Available | Negative | 369655 - 370476 | 29448.3 |
| thiamine transporter substrate binding subunit | PFRI_03720 | Not Available | Negative | 370537 - 371556 | 36738.4 |
| ribose operon repressor | PFRI_03730 | Not Available | Negative | 371553 - 372530 | 34957.1 |
| hypothetical protein | PFRI_03740 | Not Available | Positive | 372905 - 373159 | 9550.2 |
| toxin pare1 | PFRI_03750 | Not Available | Positive | 373160 - 373471 | 12092.5 |
| phenylacetate-coenzyme a ligase | PFRI_03760 | Not Available | Negative | 373479 - 374783 | 47649.2 |
| acyl-coenzyme a thioesterase paai | PFRI_03770 | Not Available | Negative | 374776 - 375213 | 15727.5 |
| acylamidase | PFRI_03780 | Not Available | Positive | 375317 - 376720 | 50060.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
