Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktotalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktotalea |
| Species | Planktotalea frisia |
| Strain | SH6-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950073 bp
Thymine Count
948589 bp
Guanine Count
1104133 bp
Cytosine Count
1103941 bp
Genome Length
4106736 bp
Protein-coding Genes
4102 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative d,d-dipeptide-binding periplasmic protein ddpa precursor | PFRI_41450 | Not Available | Positive | 4084421 - 4085992 | 57335.2 |
| dipeptide transport system permease protein dppb | PFRI_41460 | Not Available | Positive | 4086082 - 4087059 | 35040.8 |
| glutathione transport system permease protein gsid | PFRI_41470 | Not Available | Positive | 4087056 - 4087934 | 31452.1 |
| oligopeptide transport atp-binding protein oppd | PFRI_41480 | Not Available | Positive | 4087934 - 4088917 | 35593.1 |
| glutathione import atp-binding protein gsia | PFRI_41490 | Not Available | Positive | 4088919 - 4089890 | 35625.9 |
| hypothetical protein | PFRI_41500 | Not Available | Negative | 4089887 - 4090354 | 17521.6 |
| hypothetical protein | PFRI_41510 | Not Available | Positive | 4090437 - 4090865 | 15927.1 |
| glutamate--trna ligase 1 | PFRI_41520 | Not Available | Positive | 4090929 - 4092254 | 48696.8 |
| multidrug export protein mepa | PFRI_41530 | Not Available | Positive | 4092259 - 4093659 | 49503.5 |
| hypothetical protein | PFRI_41540 | Not Available | Negative | 4093656 - 4094198 | 20219.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
